blosumG_20-20_40
# Rectangular BLOSUM Scoring Matrix 20x20 in 1/4 Bit Units
# Blocks Database = blocks.dat
# Cluster Percentage: >= 40
# Entropy = 0.2851, Expected = -0.2090
C F Y W M L I V G P A T S N H Q E D R K
C 16 -2 -4 -6 -3 -2 -4 -2 -3 -5 -2 -1 -1 -2 -4 -4 -2 -2 -3 -3
F -2 9 4 1 0 2 1 0 -3 -4 -3 -1 -2 -3 -2 -4 -3 -4 -2 -3
Y -4 4 9 3 1 0 0 -1 -3 -3 -2 -1 -2 -2 2 -1 -2 -3 -1 -1
W -6 1 3 19 -2 -1 -3 -3 -2 -4 -3 -4 -5 -4 -5 -1 -2 -5 -2 -2
M -3 0 1 -2 7 3 1 1 -2 -2 -1 -1 -2 -2 1 -1 -2 -3 -1 -1
L -2 2 0 -1 3 6 2 2 -4 -4 -2 -1 -3 -3 -2 -2 -2 -3 -2 -2
I -4 1 0 -3 1 2 6 4 -4 -2 -1 -1 -2 -2 -3 -3 -4 -4 -3 -3
V -2 0 -1 -3 1 2 4 5 -4 -3 0 1 -1 -3 -4 -3 -3 -3 -2 -2
G -3 -3 -3 -2 -2 -4 -4 -4 8 -1 1 -2 0 0 -2 -2 -3 -2 -3 -2
P -5 -4 -3 -4 -2 -4 -2 -3 -1 11 -2 0 -1 -2 -2 -2 0 -2 -3 -1
A -2 -3 -2 -3 -1 -2 -1 0 1 -2 5 0 1 -1 -2 0 -1 -1 -2 -1
T -1 -1 -1 -4 -1 -1 -1 1 -2 0 0 6 2 0 -2 -1 -1 -1 -2 0
S -1 -2 -2 -5 -2 -3 -2 -1 0 -1 1 2 5 1 -1 1 0 0 -1 0
N -2 -3 -2 -4 -2 -3 -2 -3 0 -2 -1 0 1 8 1 1 -1 2 0 0
H -4 -2 2 -5 1 -2 -3 -4 -2 -2 -2 -2 -1 1 13 0 0 0 0 -1
Q -4 -4 -1 -1 -1 -2 -3 -3 -2 -2 0 -1 1 1 0 8 2 -1 2 1
E -2 -3 -2 -2 -2 -2 -4 -3 -3 0 -1 -1 0 -1 0 2 7 2 -1 1
D -2 -4 -3 -5 -3 -3 -4 -3 -2 -2 -1 -1 0 2 0 -1 2 9 -1 0
R -3 -2 -1 -2 -1 -2 -3 -2 -3 -3 -2 -2 -1 0 0 2 -1 -1 9 3
K -3 -3 -1 -2 -1 -2 -3 -2 -2 -1 -1 0 0 0 -1 1 1 0 3 6
Lambda = 0.172169, K+ = 0.074645, (K- = 0.062839, C = 0.068573, delta = 1)
Gumbel parameters
| e-value | 0.0001 | 0.001 | 0.01 | 0.1 | 1.0 | 10.0 |
|---|
| score threshold | 158 | 145 | 132 | 118 | 105 | 91 |
|---|
Complementary files