blosumG_8-8_40

#  Rectangular BLOSUM Scoring Matrix 8x8 in 1/4 Bit Units
#  Blocks Database = blocks.dat
#  Cluster Percentage: >= 40
#  Entropy =   0.2055, Expected =  -0.1671

        CFYW   MLIV   G      P      ATS    NH     QED    RK  
CFYW    6      0     -3     -4     -2     -2     -3     -2    
MLIV    0      4     -4     -3     -1     -3     -3     -2    
G      -3     -4      8     -1      0     -1     -2     -2    
P      -4     -3     -1     11     -1     -2     -1     -2    
ATS    -2     -1      0     -1      3     -1     -1     -1    
NH     -2     -3     -1     -2     -1      7      0      0    
QED    -3     -3     -2     -1     -1      0      5      0    
RK     -2     -2     -2     -2     -1      0      0      5    


Lambda = 0.173810, K+ = 0.073105, (K- = 0.061441, C = 0.067104, delta = 1)

Gumbel parameters

Complementary files

• Expected probabilities (.eij)
• Background (target) probabilities (.qij)
• Scoring matrix (real values, without log-odd) (.sij)
• .h