blosumG_20-20_45
# Rectangular BLOSUM Scoring Matrix 20x20 in 1/3 Bit Units
# Blocks Database = blocks.dat
# Cluster Percentage: >= 45
# Entropy = 0.3795, Expected = -0.2789
C F Y W M L I V G P A T S N H Q E D R K
C 12 -2 -3 -5 -2 -2 -3 -1 -3 -4 -1 -1 -1 -2 -3 -3 -3 -3 -3 -3
F -2 8 3 1 0 1 0 0 -3 -3 -2 -1 -2 -2 -2 -4 -3 -4 -2 -3
Y -3 3 8 3 0 0 0 -1 -3 -3 -2 -1 -2 -2 2 -1 -2 -2 -1 -1
W -5 1 3 15 -2 -2 -2 -3 -2 -3 -2 -3 -4 -4 -3 -2 -3 -4 -2 -2
M -2 0 0 -2 6 2 2 1 -2 -2 -1 -1 -2 -2 0 0 -2 -3 -1 -1
L -2 1 0 -2 2 5 2 1 -3 -3 -1 -1 -3 -3 -2 -2 -2 -3 -2 -3
I -3 0 0 -2 2 2 5 3 -4 -2 -1 -1 -2 -2 -3 -2 -3 -4 -3 -3
V -1 0 -1 -3 1 1 3 5 -3 -3 0 0 -1 -3 -3 -3 -3 -3 -2 -2
G -3 -3 -3 -2 -2 -3 -4 -3 7 -2 0 -2 0 0 -2 -2 -2 -1 -2 -2
P -4 -3 -3 -3 -2 -3 -2 -3 -2 9 -1 -1 -1 -2 -2 -1 0 -1 -2 -1
A -1 -2 -2 -2 -1 -1 -1 0 0 -1 5 0 1 -1 -2 -1 -1 -2 -2 -1
T -1 -1 -1 -3 -1 -1 -1 0 -2 -1 0 5 2 0 -2 -1 -1 -1 -1 -1
S -1 -2 -2 -4 -2 -3 -2 -1 0 -1 1 2 4 1 -1 0 0 0 -1 -1
N -2 -2 -2 -4 -2 -3 -2 -3 0 -2 -1 0 1 6 1 0 0 2 0 0
H -3 -2 2 -3 0 -2 -3 -3 -2 -2 -2 -2 -1 1 10 1 0 0 0 -1
Q -3 -4 -1 -2 0 -2 -2 -3 -2 -1 -1 -1 0 0 1 6 2 0 1 1
E -3 -3 -2 -3 -2 -2 -3 -3 -2 0 -1 -1 0 0 0 2 6 2 0 1
D -3 -4 -2 -4 -3 -3 -4 -3 -1 -1 -2 -1 0 2 0 0 2 7 -1 0
R -3 -2 -1 -2 -1 -2 -3 -2 -2 -2 -2 -1 -1 0 0 1 0 -1 7 3
K -3 -3 -1 -2 -1 -3 -3 -2 -2 -1 -1 -1 -1 0 -1 1 1 0 3 5
Lambda = 0.231019, K+ = 0.095168, (K- = 0.075537, C = 0.084975, delta = 1)
Gumbel parameters
| e-value | 0.0001 | 0.001 | 0.01 | 0.1 | 1.0 | 10.0 |
|---|
| score threshold | 119 | 109 | 99 | 89 | 79 | 69 |
|---|
Complementary files