empedopeptin
- Norine ID: NOR00651
- DOI: 10.26097/nor00651
- Family: empedopeptin
- Synonym(s):
- Activity: antimicrobial
- Category: peptide
- Formula: C49H79N11O19
- Monoisotopic mass: 1125.555369401 g/mol
- Comment: empedopeptin is a putative NRPS product (no synthetase genes identified).
- Source: norine
- Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
- Entry information:
- status: putative - change status to non-NRP (Norine validators only)
- last modification date: 2018-12-01 by Emma Ricart Altimiras [Swiss Institute of Bioinformatics, SIB]
- view all entry history
- Type: cyclic
- Number of monomers: 9
- Smiles: CCCCCCCCCCCC1CC(=O)N4CCCC4(C(=O)NC(CO)C(=O)N3CCCC3(C(=O)NC(CCCN=C(N)N)C(=O)NC(C(=O)NC(CO)C(=O)N2CCC(O)C2(C(=O)NC(C(=O)O1)C(O)C(=O)O))C(O)C(=O)O))
- Graph inference:
- Monomeric composition :
1 OH-Asp 2 3OH-Pro 3 D-Ser 4 D-OH-Asp 5 Arg 6 Pro 7 D-Ser 8 D-Pro 9 C14:0-OH(3) - Graph representation: OH-Asp,3OH-Pro,D-Ser,D-OH-Asp,Arg,Pro,D-Ser,D-Pro,C14:0-OH(3) @1,8 @0,2 @1,3 @2,4 @3,5 @4,6 @5,7 @6,8 @0,7
- Atomic structure:
- Empedobacter
- gram: negative
- synonyms:
- taxid: 59734 (view NCBI taxonomy browser)
- Links between organisms producing the empedopeptin: Empedobacter
- Empedopeptin (BMY-28117), a new depsipeptide antibiotic. II. Structure determination
Sugawara K, Numata K, Konishi M, Kawaguchi H, The Journal of antibiotics , 1984, Sep,37(9):958-64.
DOI: 10.7164/antibiotics.37.958
pubMed: 6501109
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