- pairs() (procars.utils.util_classes.SparseMatrix method)
- partition_species() (in module procars.step_modules.compute_initialpqtree)
- procars.procars_steps (module)
- procars.step_modules.compute_conserved_adjacencies (module)
- procars.step_modules.compute_dcj_adjacencies (module)
- procars.step_modules.compute_initialpqtree (module)
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- procars.step_modules.compute_pqtree (module)
- procars.step_modules.compute_resolved_conflicts (module)
- procars.utils.initial_files_reader (module)
- procars.utils.util_adjacency_functions (module)
- procars.utils.util_classes (module)
- procars.utils.utils_IO (module)
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