>FM877783.1/2480-2592 FM877783.1 HIV-1 M_97CD.MBFE250 proviral complete genome, isolate 97CD.MBFE250
ATAGGTACAGTATTAGTGGGACCTACACCTGTCAACATAATTGGAAGGAATATGTTGACTCAGATTGGCTGTACTTTAAATTTTCCAATTAGTCCCATTGAAACTGTACCAGT
>M62320.1/1912-2024 Human immunodeficiency virus type 1 Ugandan isolate U455, complete proviral genome.
ATAGGTACAGTATTGGTAGGACCTACACCTGTCAACATAATTGGAAGGAATATGTTGACTCAGATTGGTTGTACTTTAAATTTTCCAATTAGTCCTATTGAAACTGTACCAGT
>AF005496.1/1813-1925 HIV-1 isolate 90CR056 from Central African Republic, complete genome.
ATAGGTACAGTATTAGTAGGACCTACACCTGTCAATATAATTGGAAGGAATATATTGACTCAAATTGGTTGCACCTTAAATTTTCCAATTAGTCCTATTGAAACTGTACCAGT
>K02013.1/2048-2160 Human immunodeficiency virus type 1, isolate BRU, complete genome (LAV-1).
ATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAGATTGGTTGCACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGT
>M17451.1/1983-2095 Human immunodeficiency virus type 1, isolate RF (HAT-3), complete genome.
ATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAGATTGGTTGCACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGT
>M93258.1/2464-2576 M93258.1 Human immunodeficiency virus type 1 (YU-2) RNA
ATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAGATTGGTTGCACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGT
>K02007.1/2473-2585 Human immunodeficiency virus type 1, isolate ARV-2/SF2, complete proviral genome.
ATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAGATTGGTTGTACTTTAAATTTCCCCATTAGTCCTATTGAAACTGTACCAGT
>U39362.2/2465-2577 Human immunodeficiency virus type 1 proviral DNA, gag, pol, vif, vpr, vpu, env, tat, rev and nef genes, complete cds.
AAAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAGATTGGTTGCACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGT
>NW_012562456.1/796-684 NW_012562456.1 Salmo salar isolate Sally breed double haploid unplaced genomic scaffold, ICSASG_v2 scf_jcf1000422878_0_0, whole genome shotgun sequence
ATAGGTACAGTGTTAATAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAGATTGGTTGCACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGT
>FM877782.1/2471-2583 FM877782.1 HIV-1 M_02CD.MBTB047 proviral complete genome, isolate 02CD.MBTB047
ATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGGAATATGTTGACTCAGATTGGCTGTACTTTAAATTTTCCAATTAGTCCTGTTGAAACTGTACCAGT
>AF077336.1/1803-1915 HIV-1 isolate VI850 from Democratic Republic of the Congo, complete genome.
ATAGGTACAGTGTTAGTAGGACCTACGCCTGTCAACATAATTGGAAGAAATATGTTGACTCAGATTGGTTGTACTTTAAATTTTCCAGTTAGTCCTATTGAAACTGTACCAGT
>KJ206289.1/1808-1920 KJ206289.1 Human immunodeficiency virus isolate 10MYPR226, partial genome
ATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAGCTTGGKTGTACTTTAAATTTTCCCATTAGTCCTATTGATACTGTACCAGT
>BMDT01000023.1/1731-1843 BMDT01000023.1 Enterococcus alcedinis CCM 8433 DNA, sequence23, whole genome shotgun sequence
ATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAGATTGGCTGCACTTTAAATTTTCCCATTAGTCCTATTGAGACTGTACCAGT
>BMOE01000030.1/1784-1896 BMOE01000030.1 Deinococcus aquiradiocola JCM 14371 DNA, sequence30, whole genome shotgun sequence
ATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAGATTGGCTGCACTTTAAATTTTCCCATTAGTCCTATTGAGACTGTACCAGT
>FM877781.1/2467-2579 HIV-1 M_02CD.LBTB084 proviral complete genome, isolate 02CD.LBTB084
ATAGGTACAGTATTAGTAGGACCTACGCCTGTCAACATAATTGGAAGGAATATGTTGACTCAAATTGGCTGTACTTTAAATTTTCCAATTAGTCCCATTGAAACTGTACCAGT
>JX679207.1/1685-1797 JX679207.1 Human immunodeficiency virus from China isolate 1439, partial genome
ATAGGTACAGTATTAGTAGGACCCACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAGCTTGGTTGCACTTTAAATTTTCCCATCAGTCCTATTGAAACTGTACCAGT
>FM877784.1/1664-1776 HIV-1 M_97CD.KMST91 proviral gag, pol , vif, vpr, vpu, gp160 and nef (partial) genes, isolate 97CD.KMST91
ATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATATATTGACTCAGATTGGTTGTACTTTAAATTTCCCCATTAGTCCTATTGAGACTGTACCAGT
>M17449.1/2481-2593 Human immunodeficiency virus type 1, isolate MN, complete genome.
ATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAGCTTGGGTGCACTTTAAATTTTCCCATTAGTCCTATTGAAACTGTACCAGT
>K03454.1/2012-2124 Human immunodeficiency virus type 1, isolate ELI, complete genome.
ATAGGTACAGTATTAGTAGGACCTACGCCTGTCAACATAATCGGAAGAAATTTGTTGACCCAGATTGGCTGCACTTTAAATTTTCCAATTAGTCCTATTGAAACTGTACCAGT
>FM877778.1/2468-2580 FM877778.1 HIV-1 M_97CD.KFE267 proviral complete genome, isolate 97CD.KFE267
ATAGGTACAGTGTTAGTGGGACCTACACCTATCAACATAATTGGCAGAAATATGTTGACTCAGATTGGCTGTACTTTAAATTTTCCAATTAGTCCCATTGAAACTGTACCAGT
>AF193276.1/1692-1804 HIV-1 CRF03_AB isolate KAL153 from Russia, complete genome.
ATAGGTACGGTATTAGTAGGACCTACCCCTGTCAACATAATTGGAAGAAATATGTTGACTCAGCTTGGTTGTACTTTAAATTTTCCAATAAGTCCTATTGAAACTGTACCAGT
>FM877779.2/2472-2584 HIV-1 M_02CD.LBTB032 proviral complete genome, isolate 02CD.LBTB032
ATAGGCTCAGTATTAGTGGGACCTACACCTGTCAACATAATTGGAAGGAATATGTTGACTCAGATTGGCTGTACTTTAAATTTTCCAATTAGTCCCATTGAAACTGTACCAGT
>K03455.1/2466-2578 Human immunodeficiency virus type 1 (HXB2), complete genome; HIV1/HTLV-III/LAV reference genome.
ATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATCTGTTGACTCAGATTGGTTGCACTTTAAATTTTCCCATTAGCCCTATTGAGACTGTACCAGT
>X04415.1/2041-2153 Human lymphadenopathy virus (MAL isolate), complete genome.
ATAGGTACAATATTGGTAGGACCTACACCTGTCAACATAATTGGACGAAATATGTTGACTCAGATTGGTTGTACTTTAAATTTTCCAATTAGTCCTATTGAGACTGTACCAGT
>AF049337.1/1832-1944 HIV-1 CRF04_cpx clone 94CY032-3 from Cyprus, complete genome.
ATAGGCACAGTGTTAGTAGGACCTACACCTGTCAACATAATTGGACGAAACATGTTGACTCAGCTTGGTTGTACTTTAAATTTTCCAATTAGTCCTATTGAAACTGTACCAGT
>AM851090.1/1671-1783 AM851090.1 Human immunodeficiency virus type 1 02CD.LBR024 proviral gag gene (partial), vif gene, nef gene and env gene
ATAGGTACAGTACTAGTAGGACCTACACCTGTCAATATAATTGGAAGGAATTTATTGACTCAAATTGGTTGCACGCTAAATTTTCCAATCAGTCCTATTGAAACTGTACCAGT
>U52953.1/1804-1916 U52953.1 HIV-1 92BR025 from Brazil, complete genome
ATAGGTACAGTACTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAACATGTTGACTCAGCTTGGATGCACACTAAATTTTCCAATTAGTCCCATTGAAACTGTACCAGT
>AJ006022.1/2060-2172 Human immunodeficiency virus type 1 complete proviral genome
GTTGGTACAGTATTAGTAGGACCAACACCTGTTAATATTATAGGAAGAAATCTTTTAACCCAGATTGGCTGTACTTTAAATTTTCCAATAAGTCCTATTGAAACTGTACCAGT
>DQ373063.1/2012-2124 Simian immunodeficiency virus isolate SIVcpzMB66, complete genome.
GTAGGTACAGTTTTAGTAGGACCCACACCTGTAAATATCATAGGAAGGAATATTTTGACTCAAATTGGATGCACTTTAAATTTCCCCATCAGTCCTATTGAAACTGTACCAGT
>U46016.1/1858-1970 U46016.1 Human immunodeficiency virus type 1 subtype C complete proviral genome
ATAGGTACAGTACTAGTAGGACCTACACCTGTCAACATAATTGGCAGAAACATGTTGACTCAGCTTGGACGCACATTAAACTTTCCAATTAGTCCCATTGAAACTGTACCAGT
>AF103818.1/2526-2638 Simian immunodeficiency virus strain US, complete genome.
CAGGGTTCAGTTTTAGTGGGACCAACACCAGTAAATATTATTGGCAGGAATATTTTAACACAAATTGGATGTACTTTAAATTTTCCTATCAGCTCTATTAAAACTGTACCAGT
>DQ373065.1/2038-2150 Simian immunodeficiency virus isolate SIVcpzEK505, complete genome.
GTTGGCACAGTCTTAGTAGGGCCAACACCTGTTAATATTATTGGAAGAAATTTTCTGACACAAATTGGTTGTACTCTAAATTTTCCAATAAGTCCTATTGAAACCATACCAGT
>L20587.1/2521-2633 L20587.1 Human immunodeficiency virus type 1, complete genome
CAGGGAACAGTATTGGTGGGACCTACTCCTGTTAATATTATTGGAAGAAATATATTGACAGGATTAGGTTGTACACTAAACTTCCCTATAAGCCCCATAGCCCCAGTGCCAGT
>AF447763.1/2110-2222 Simian immunodeficiency virus isolate SIVcpzTAN1, complete genome.
AGAGCCACTGTCCTAGTGGGAGAAACCCCCATTAATATAATAGGTAGAAATATTTTAAAGCAATTAGGATGTACCTTAAATTTTCCTATTAGCCCAATAGAGGTAGTAAAAGT
>AY169968.1/2046-2158 Simian immunodeficiency virus isolate SIVcpzCAM13, complete genome.
CAAGGGACAGUGUUGGUGGGACCAACACCUGUCAAUAUAAUUGGGAGAAAUAUUUUAACACAGAUAGGGUGCACACUGGUAUUCCCUAUCAGUUCAAUUGAAACUGUCCCAGU
>X52154.1/2527-2639 Chimpanzee immunodeficieny virus (CIV) (SIV(cpz)) genome
GUAGGGACAGUAUUAGUAGGACCAACACCUGUAAAUAUAAUUGGAAGAAAUAUUUUGACACAAUUGGGUUGUACUCUAGUGUUCCCAAUUAGUUCAAUUGAAACUGUCCCAGU
>DQ878451.1/214-326 HIV-1 isolate 1182.48-4217-20030915 pol protein (pol) gene, partial cds.
AUAGGWUCAGURUUGGUAGGACCUACACCCGUCAACGUAAUUGGAAGAGGCUUGAUGACUCGGAUGGGCUGUACUUUAAAUUUUCCAAUUAGUCCUAUUAAAACUGUACCAGU
>DQ878511.1/214-326 HIV-1 isolate 1182.48-4289-20030918 pol protein (pol) gene, partial cds.
MKAACUACAGUAUUARUAGGACCUACACCUGUCAACGUARUUGGAAGGAAUCUGAUGACUCAGCUUGGUUGCACCUUAAAUUUCCCCAUUAGUCCUAUUGAAACUGUACCAGU
>DQ672623.1/2268-2380 HIV-1 isolate SG1 from Italy, partial genome.
AUAGGUACAGUAUGAGUACGACCUACACCUGUCAACAUAGUNGAACGAAAUCUGUAGACUMGAAUGGUUUGCACUCUAAAUUUUCCCAUCAGUCCUAUUGAAACUGUACCAGU
>DQ369152.1/214-326 HIV-1 isolate 21B-2206 pol protein (pol) gene, partial cds.
AUAAGUACAGUAUUAGUGGGACCUACACCUGUCAGYGUAGUUGGAAGAAAUCUAAUGUCUCAACUUGGUUGCACUUUAAAUUUUCCYAUUAGUCCCAUUGAAACUGUACCAGU
>DQ878674.1/214-326 HIV-1 isolate 1182.48-6075-20030717 pol protein (pol) gene, partial cds.
GUAGGUUCUGUAUUAGUAGGACCUACCCCUGCCAACAUAAUUGGAAGAAAUGUGAUGACCCAGCUUGGCUUUACUUUAAAUUUUCCCAUUAGUCCUAUUGAAACAGURCCAGU
>DQ017383.1/1970-2082 HIV-1 isolate 04CM-1131-03 from Cameroon, complete genome.
GUUGGUACAGUGUUAGUAGGACCAACACCUGUUAAUAUUAUAGGAAGAAACUUUUUAACACAGAUUGGCUGUACUCUAAAUUUUCCAUUAAGUCCUAUUAAAACUGUACCAGU
>DQ878307.1/214-326 HIV-1 isolate 1182.48-4078-20030225 pol protein (pol) gene, partial cds.
AUAGGUGAAGUGCUAGUAGGACCUACACCUUUYAAYGUAAUUGGAAGGAAUAUGAUGACUCAGAUUGGUUGUACUCUAAAUUUUCCYAUUAGUCCUAUUGACACUGUACCAGU
>AF347286.1/214-326 HIV-1 isolate 6131 from Germany truncated pol protein (pol) gene, partial cds.
GAAGGUACAGUAUUAAUAGGACNUACACCNGUCAACNUNAUAGGAAGAGAUNUGAUGACUCAGNUUUGUUGCACUUUAAAUUUUCCCAUUNGUCCUAUUGAAACUGUACCAGU
>EF199601.1/214-326 HIV-1 isolate 05CNSHD0073 from China pol protein (pol) gene, partial cds.
GUAGGUACGGUAUUAGUGGGACCUACCCCUGUCGACAUAAUUGGAAGAAAUCUGUUGACUCGCCUUGGUUGCACUUUAAAUUUUCCAAUCGAUCCCGUUGAAACUGUACCAGU
>DQ878079.1/214-326 HIV-1 isolate 1182.48-3170-20030409 pol protein (pol) gene, partial cds.
AAAUGUACAGUAGUAAUAGGACCUACACCUGUCAACGUAGUUGGAAGAAAUCUGAUGACUCAAAUUGGUUGYACCUUAAAUUUUCCCAUUUGUCCUAUUAAAACUGUACCAGU
>DQ373064.1/2021-2133 Simian immunodeficiency virus isolate SIVcpzLB7, complete genome.
CUAGGUACAGUUUUAGUAGGACCCACACCAGUAAAUAUCAUAGGAAGGAACAUUUUAACUCAAAUUGGAUGUACUCUAAAUUUUCCUAUUAGCCCUAUUGAAACUGUACCAGU
>AY771520.1/214-326 HIV-1 isolate BREPMPOL179 from Brazil pol protein (pol) gene, partial cds.
GUAGGUUCAGUGUUGAUAGGACCUACGCCUGUCAAYGUAAUUGGAAGAAAUAUAAUGACUCAGCUUGGUUGUACUUUAAAUUUUCCCAUUAGUCCUAUUGARACUGUACCAGU
>DQ878094.1/214-326 HIV-1 isolate 1182.48-3186-20030506 pol protein (pol) gene, partial cds.
AUAGGGUCAGUGUUAGUAGGACCGACACCUGCCAACGUAAUUGGAAGGAAURUACUGACUAAGAUUGGUUGUACGUUAAAUUUUCCAAUCAGUCCUAUUGAAACUGUACCAGU
>DQ877823.1/214-326 HIV-1 isolate 1182.48-1433-20030220 pol protein (pol) gene, partial cds.
AUAGGUUCAGUAUURGUAGGACCCACACCUGUCGAUGUAAUUGGAAGAAAUCUAAUGACUAAGCUUGGUUUCACUUUAAAUUUUCCCAUUAGUCCUAUUAAUACUGUACCAGU
>AY366010.1/214-326 HIV-1 isolate 122360 from Argentina pol protein (pol) gene, partial cds.
AUAAGUACAGURUUAGUAGGAGCUACMCCYGUCAAUGUAAUUGGGAGAAAUCUAAUGACUCAGAUUGGYUGYACUUUAAAUUUUCCUAUCAGUCCUAUUGAAACUGUACCAGU
>AY857177.2/521-633 HIV-1 isolate 9546962 from Australia, partial genome.
AUAGGUACAGUAUUAGUAGGACCUACMCCGGUCAACAUAAUUGGAAGAAAUCUGUUGACUCAGCUUGGUUGCMCUUUAAAUUUUCCCAUCAGUCCUAUUGAAMCUGUNNNNNN
>AY995543.1/214-326 HIV-1 isolate 2363-1134A from Italy pol protein (pol) gene, partial cds.
AUAAGUUCAGUGUUAAUAGGACCUACACCUGUCRACAUAAUUGGAAGARAUYUGAUGACUCAGAUUGGUUGCACUYUAAAUUUUCCCAUUKGUCCUAUKGAAACUGKACCAGK
>EF449918.1/214-326 HIV-1 isolate 662849 from Switzerland pol protein (pol) gene, partial cds.
AUUGGUACRGUACUAGUAGGACCUACACCUGUCAACAUARUUGGAAGAGAUCUGUUGACUCAGCUUGGGUGUACACUAAAUUUUCCAAUUAGCCCCAUUAAAACUGUACCAGU
>AF115393.1/1877-1989 Simian immunodeficiency virus strain SIVcpz, complete genome.
ACAGGCACGGUAUUGGUGGGACCAACACCAGUGAAUAUAAUUGGCAGAAAUAUAUUGACACAAAUUGGCUGUACUUUAAAUUUUCCUAUAAGUCCCAUUGAAACAGUGCCAGU
>AY787528.1/151-263 HIV-1 isolate YRG42 from India pol protein (pol) gene, partial cds.
AUAGGUACAGUAUUAGUAGGACCCACACCUAUCAACAUAAUUGGAAGAAAUAUGUUGACUCAACUUGGAUGCACACUAAAUUUUNNNNNNAGUCCUAUUGAAACUGUGCCAGU
>AF347260.1/127-239 HIV-1 isolate 4625 from Germany truncated pol protein (pol) gene, partial cds.
ACGGGUACAGUAUUAAUANGACCNGCNCCUGUCAACAUAAUUGGAANANNUCUGAUGACUCAGAUNGGUUGCACCUUAAAUUUUCCCAUUAGUCCUAUUGAAACUGUACCAGU
>AY855615.1/214-326 HIV-1 isolate 84A from Italy pol protein (pol) gene, partial cds.
AUAGGUACAGUGUUGGUAGGACCUACGCCUGUCAACGUAGUUGGAAGAAAUAUAAUGACUAAKAUUGGUAGACCUCUAAAUUUUCCAAUUAGUCCUAUUGAAACUGWACCAGU
>EF517447.1/184-296 HIV-1 isolate patient 1-51-00-297 pol polyprotein (pol) gene, partial cds.
GUAGGCACAGUGUUAGUAGGACCUACACCUGUCAACAUAAUUGGAAGGAACCUGUUGACUCGGAUUGGCUGUACUUUAAAUUUUCCMAUYWGUCCYAUUGAVACKGURCCAGU
>EF517442.1/184-296 HIV-1 isolate patient 1-96-99-258 from Bulgaria pol polyprotein (pol) gene, partial cds.
AUAGGUACAGUAUUAGUAGGACCGACACCUGCCGACAUAAUUGGACGAAAUAUGUUAACUCAGAUUGGUUGCACUCUAAAUUUCCMAAUYWGUCCYAUUGAVACKGURCCAGU
>AY635695.1/505-617 HIV-1 isolate Pingxiang-44 from China gag protein-like (gag) and pol protein-like (pol) genes, partial sequence.
AUAGGUACAGUAUUGGUNGGACCUACUCCUGCUGACAUAAUUGGACGAAAUAUGUUGACUAAGAUUGGUUGUACUUUAAAUUUCCCAAUUAGUCCUAUUGACGCUGUACCACC
>AY771412.1/214-326 HIV-1 isolate BREPMPOL056 from Brazil pol protein (pol) gene, partial cds.
AUAGGUACAGUGUUGAUAGGACCUACACCURUCAACRUARUUGGAAGAAAUUUGAUGACUAAGMUUGGUUGCACUUUAAAUUUUCCCAUUAGUYCUAUUAACACUGUACCAGU
>DQ869194.1/166-278 HIV-1 isolate Cam12DBS from Cameroon pol protein (pol) gene, partial cds.
AUAGGKACAGUAUUAGUAGGACCUACMCCYGUCAACAUAAUUGGNCGAAAUAUGUUGACCCNGAUUGGNUGUACUUUVAAUUUUCCNAUCAGUCCUAUUGAAACUGKACCAGC
