Protea

PFAM family PF07974 [description]

• 3 homologous coding sequences: fasta
• Average identity percentage: 44.3 %
• Predicted amino acid sequences

         CLUSTAL W (1.83) multiple sequence alignment


         Q19267_CAEEL/158-187      CF---GKGSCHGDGSREGSGKCKCETG----YTGNLC
         Q86G85_PSEIC/635-670      CRSPENNEICSGNG-QCVCGQCMCNSDDDRHYSGKYC
         O97702_CANFA/508-543      CSPREGQPACSQRG-ECLCGQCVCHSSDFGKITGKYC
                                   *    .:  *   * .  .*:* *.:.     :*: *
    

• Multiple alignment deducted from amino acid sequences alignment

         CLUSTAL multiple alignment produced by protea version 0.04
      
         Q19267_CAEEL/158-187      UGUuuu---------ggaaaaggauccUGUCAUGGAGAUGGAAGCCGCGAAGGCAGUGGA
         Q86G85_PSEIC/635-670      UGCcggucaccugaaaacaacgaaaucUGCAGUGGAAACGGA---CAAUGUGUAUGUGGA
         O97702_CANFA/508-543      UGCagcccccgggagggccagcccgccUGCAGCCAGCGGGGC---GAGUGCCUGUGUGGC
	                           ***                *      ***          **              ****

         Q19267_CAEEL/158-187      AAGUGUAAAUGUGAGACUGGA------------UAUACUGGAAAUCUAUGC
         Q86G85_PSEIC/635-670      CAAUGUAUGUGUAACUCUGACGAUGACCGCCACUAUAGUGGCAAAUACUGC
         O97702_CANFA/508-543      CAAUGUGUCUGCCAUAGCAGUGACUUUGGCAAGAUCACGGGCAAGUACUGC
	                            * ***   **  *                      *  ** **    ***
    

PFAM family PF00608 [description]

• 4 homologous coding sequences: fasta
• Average identity percentage: 43.5 %
• Predicted amino acid sequences

         CLUSTAL W (1.83) multiple sequence alignment


         FIB1_ADE41/244-273      NNSLSLVITSPLKVINSMLAVGVNPPFTIT
         FIBP_ADE04/129-158      LNTLVSAFGSGLGLSGSALAVQLASPLTFD
         FIB1_ADE40/327-356      TLNVNANTSKGLAIENNSLVVKLGNGLRFD
         FIBP_ADEB3/213-242      DNKTVVKAGPGLTITNQALTVATGNGLQVN
                                   .        * : .. *.*     : .       
    

• Multiple alignment deducted from amino acid sequences alignment

         CLUSTAL multiple alignment produced by protea version 0.04

         FIB1_ADE41/244-273        AACAACUCUCUCUCCUUAGUCAUUACUUCUCCUUUAAAAGUUAUUAAUUCUAUGUUAGCC
         FIBP_ADE04/129-158        UUGAAUACAUUAGUCUCAGCUUUUGGCUCAGGUUUAGGACUCAGUGGCAGCGCCCUGGCA
         FIB1_ADE40/327-356        ACAUUAAACGUCAAUGCCAAUACCAGCAAAGGUCUUGCUAUUGAAAAUAACUCACUAGUU
         FIBP_ADEB3/213-242        GAUAAUAAAACUGUCGUUAAGGCUGGGCCCGGACUUACAAUAACUAAUCAAGCUCUUACU
                                                                     *     *              *    
         FIB1_ADE41/244-273        GUUGGGGUUAACCCGCCUUUUACCAUCACU
         FIBP_ADE04/129-158        GUACAGUUAGCCUCUCCACUUACAUUUGAU
         FIB1_ADE40/327-356        GUUAAGCUAGGAAACGGUCUUCGCUUUGAU
         FIBP_ADEB3/213-242        GUUGCUACCGGGAACGGCCUUCAGGUCAAC
                                   **                 **    *    
    

Non coding family: RFAM family RF00455 [description]

• 4 non-coding sequences: fasta
• Average identity percentage: 68.4 %