Enter regulatory sequences [?]

Enter the sequences name (optional)

Available organisms: rat (rn4) mouse (mm9) human (hg19) chicken (galGal3) d.melanogaster (dm3)

Enter a list of RefSeq identifiers (NM_*)
Paste your data

or upload a file
Enter a set of sequences in FASTA format [?]
Paste your data

or upload a file

Location [?]
(boundaries of the sequences in regard of the TSS. authorized values : -10000 to 5000)

Select transcription factor binding profiles [?]

Available weight matrices are public TRANSFAC (6.0) matrices and JASPAR 2009 vertebrate matrices

Use public TRANSFAC matrices
Use all JASPAR vertebrate matrices
Use all available TRANSFAC and JASPAR matrices
Select weight matrices in the list below
Upload a file containing a list of weight matrice identifiers [?]

Adjust parameters [?]

Number of clusters to display [?] (max 25)
Maximum P-value [?]
Ratio (density of clusters) [?]

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